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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002939
species: Centaurea maculosa
miRNA family: miR394a-3p
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTTGGTATCTCTTTGTAAA

miRNA*
 AATAAAGGGTTTCCTGCAGAT

mismatches: 5
bulges: 0
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pre-miRNA
 TCAATTCATGGCGGTTTAATAAAGGGTTTCCTGCAGATTTCTTTGGCATTCTGTCCACCTCCCTATTCATGTATCAAACCCCACTATAGGAAAAGCTAAA
AAGAAAGAAAAAGAAAAAGAAACCCGTGTGTGTAATTAGGGTTTCGTAGTTTGCTAAGAAAAAAAAAAGAAAAAAGAAAGAATCTAAGGCAAGATTTTTT
CTTTTGTGTGTGTAATTAGTGTGTGGAGGTGGACATACTGTCAACGGAGCTCTGTTGGTATCTCTTTGTAAAACCCTCTTGAAGTT

dot-bracket secondary structure
....((((.((.(((((.((((((((...((.(((((.((((((((((...(((((((((((.(((((.((((...........)))).)))((((((..
..................(((((((..((.....))..))))))).))))))(((((..............((((((((((((((......)))))))))
)))))..........))))).)).)))))))))))...)))))).)))).))))).))...)))))))).))))).)).))))...


SIMILARITIES
miRBase ptc-MIR394b: 0.000000000000004

PMRD ptc-miRf10096-akr: 0.000000001

microPC miR394: 0.00006		UniProt no hits

RFAM MIR394: 0.00002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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