miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Artemisia annua



ABOUT THIS RECORD

ID: MNEST002992
species: Artemisia annua
miRNA family: MIR1530
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTCACATAAGTTAAAATTC

miRNA*
 TTTTTATTTTAAGTGTAATTT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 CATCATGCAACATTTCACATAAGTTAAAATTCTAGCAAGTTGCTTTACAACCGTTAAAAATATAAATATTAATGAAAGTGGATCAAAAGCAGTCACGAGT
AGTGATAATAATCCAAGTGAATATTGGTTAACAGATTAGGCTGGTAGTAATAGCGTTTTACTTGACTGAGTCATTGCCGATGTGTCACCCAAAGAGACTA
GTCCCCTTATTACATTTGTTGTACACGACTCCGTCGTCTAGGTAAGAAAAGGAGAAGTGGGTCAGTCAAGTGACCTATTTGTATGCATGTTTGTGTATGT
GATTTTTATTTTAAGTGTAATTTTGTAGGGT

dot-bracket secondary structure
.(((.(((((.(((.(((.((((.(((((.((..((...(((.(((((...((((((...........))))))...))))).)))..)).(((((....
.)))))..(((.((((.......)))))))(((...(((((..(((..(((((.(((..((((((((((.(((((.((......(((((...((((((.(
(((....(((.((....)).)))...))))..))).))).)))..))...))...))))).))))))))))))))))))....)))..)))))....)))
)).))))).)))).))).))).))))).)))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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