ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIRf345
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACCAAAGGACTCTGCCCTTC miRNA* AGGGCAGAGCTTTTGGTTTT mismatches: 1 bulges: 1 |
pre-miRNA
ACTGGGGGGGACACCAAAGGACTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTGGTTTTTCATGTTG
dot-bracket secondary structure
.......((((.((((((((.((((((((((((.((..((.....))..))..)))))))))))))))))))).))))......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTGGGGGGGACACCAAAGGACTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTGGTTTTTCATGTTG
dot-bracket secondary structure
.......((((.((((((((.((((((((((((.((..((.....))..))..)))))))))))))))))))).))))......
SIMILARITIES| miRBase no hits PMRD ptc-miRf12309-akr: 8e-23 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
