ABOUT THIS RECORDspecies: Citrus clementina
miRNA family: MIRf714
source: miRNEST
Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAGGGTCTCGTCCTCAAGGA miRNA* CAACAAGGATGACACTCTTGTC mismatches: 5 bulges: 1 |
pre-miRNA
ATCGAGGGCGACAAGGGTCTCGTCCTCAAGGACAAGGCTGCCCACCACGCCATTTCCAGCAAGTTCGACAAGCCCATCACCAACAAGGATGACACTCTTG
TCGTTCAGTA
dot-bracket secondary structure
.....(((((((((((((.(((((((...((....((((.........((........))..........)))).....))....))))))).)))))))
))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATCGAGGGCGACAAGGGTCTCGTCCTCAAGGACAAGGCTGCCCACCACGCCATTTCCAGCAAGTTCGACAAGCCCATCACCAACAAGGATGACACTCTTG
TCGTTCAGTA
dot-bracket secondary structure
.....(((((((((((((.(((((((...((....((((.........((........))..........)))).....))....))))))).)))))))
))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q6Q487|CALX_ASPFU: 0.000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
