ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf818
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCTGCTGCAACTGTCGATGA miRNA* GGCGATAATTGACAGAGTATA mismatches: 3 bulges: 2 |
pre-miRNA
GGAAGACGTGACGGCGATAATTGACAGAGTATATTGATCTTCTAGATGCTGCTGCAACTGTCGATGATGATGATGA
dot-bracket secondary structure
...........((.(((((.(((.((((((((...((...))...))))).)))))).))))).))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GGAAGACGTGACGGCGATAATTGACAGAGTATATTGATCTTCTAGATGCTGCTGCAACTGTCGATGATGATGATGA
dot-bracket secondary structure
...........((.(((((.(((.((((((((...((...))...))))).)))))).))))).))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
