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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST003233
species:
Arabidopsis thaliana
miRNA family:
MIR2083
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATGGACGAGTGCAAGAATT
miRNA*
TTTGGTTTTGTTTGTTTTT
mismatches:
4
bulges:
2
View larger
pre-miRNA
AACCTTA
TTTGGTTTTGTTTGTTTTT
AATGAGAAATTTAGGGGGATAATGTCGATTAAAAA
AGATGGACGAGTGCAAGAATT
TATGGTCAT
dot-bracket secondary structure
.(((..(
(((.((.((((((((((((
(((..((...(((......)))..)).))))))..
.)))))))))..))..)))).
...)))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
degradome data
download this record