ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR399
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCAAAGGAGAGCTGCCCTG miRNA* GGGCTTGTCTCTTTTGGCAGG mismatches: 2 bulges: 2 |
pre-miRNA
GGGGCTTGTCTCTTTTGGCAGGTAATGGTGATTACTTTGGATTAATTTAGAGCTACCAAAATATGTCTTATATAGTAATCAACTTGCCAAAGGAGAGCTG
CCCTGTGAGTGTTTGATTTACACACTTGTCTCCT
dot-bracket secondary structure
(((((..((((((((((((((((.....((((((((..((((..((((..........))))..)))).....))))))))))))))))))))))).).)
))))..((((((.((...)).)))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGGGCTTGTCTCTTTTGGCAGGTAATGGTGATTACTTTGGATTAATTTAGAGCTACCAAAATATGTCTTATATAGTAATCAACTTGCCAAAGGAGAGCTG
CCCTGTGAGTGTTTGATTTACACACTTGTCTCCT
dot-bracket secondary structure
(((((..((((((((((((((((.....((((((((..((((..((((..........))))..)))).....))))))))))))))))))))))).).)
))))..((((((.((...)).)))))).......
SIMILARITIES| miRBase mtr-MIR399b: 0.000000000007 PMRD mtr-miR399b: 0.000000000007 microPC miR399: 0.0001 | UniProt no hits RFAM mir-399: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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