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Species belonging to selected taxon:

Amborella trichopoda, Nuphar advena



ABOUT THIS RECORD

ID: MNEST000035
species: Amborella trichopoda
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Amborella trichopoda Amborella Amborellaceae Amborellales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGGAAGGGGCATGCAGTGGGA

miRNA*
 TCGCTGTTGGCCCTTTTTAAG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CTGGGTTCGGTAGGAAGGGGCATGCAGTGGGAGATATTCCTGGGGTGCGTTTTAAGGTGGTCAAAGTCTCTGGGGTCTCGCTGTTGGCCCTTTTTAAGGA
GAAGAA

dot-bracket secondary structure
(((....)))..(((((((((..(((((((((.....((((((((.((.................)))))))))))))))))))..))))))))).....
......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|P46297|RS23_FRAAN: 0.000000000003

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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