miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003572
species: Zea mays
miRNA family: MIR2123
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAAAAATCAACGGTGTCATA

miRNA*
 TAACACTATTGATTTTTTTTG

mismatches: 2
bulges: 0
View larger
pre-miRNA
 CGAAGTGAGTACTACCTCCGTTCATAAATATATAACACTATTGATTTTTTTTGAAAACTTTGACCACTCGTTTTATTCAAAATATTTATTCTAAAATGTA
AAATTTTAAGTCAAGCACAAACTAAATCATATAAAAATAAATGATAACTCATTATTTTTTTAATAAAACGAGTGATTAAATTTTTTTTAAAAAAATCAAC
GGTGTCATATATTTACGAACGGGGAGCACTTACCATTG

dot-bracket secondary structure
....((((((.((.((.((((((.(((((((((.(((((.(((((((((((.(((((.(((((.(((((((((((((.((((.((..((..((((((...
..))))))(((.........)))..(((((.((....)).))))).....)).)).)))).))))))))))))).))))).)))))..))))))))))).
))))).))))))))).)))))))))).)))))).....


SIMILARITIES
miRBase osa-MIR818e: 0.0000008

PMRD osa-miR818e: 0.0000008

microPC no hits		UniProt no hits

RFAM MIR812: 0.0000009		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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