miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina

ABOUT THIS RECORD

ID: MNEST000386
species: Citrus sinensis
miRNA family: MIR2004
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTTGTTTTTATTTTATTTTAT

miRNA*
CTTAGATGATAATAAAAATGTGTG

mismatches: 4
bulges: 1

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pre-miRNA
TTTGATGCTCTTTTGTTTTTATTTTATTTTATTNCATGCAAGGTGTTGGAGCTTAGATGATAATAAAAATGTGTGGGCTCTTT

dot-bracket secondary structure
...((.((((...((((((((((((((((..((..((((...))))..))....)))))).))))))))))...))))))...

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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