ABOUT THIS RECORDspecies: Citrus sinensis
miRNA family: MIRf266
source: miRNEST
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCGGATCCGGATCCGGATGCA miRNA* CATCCGAATCCAGATCCGGAT mismatches: 4 bulges: 0 |
pre-miRNA
GAAACTTACATCCGGATCCGGATCCGGATGCACCTACATCCGAATCCAGATCCGGATTATGCCGA
dot-bracket secondary structure
.........(((((((((.((((.((((((......)))))).)))).)))))))))........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAAACTTACATCCGGATCCGGATCCGGATGCACCTACATCCGAATCCAGATCCGGATTATGCCGA
dot-bracket secondary structure
.........(((((((((.((((.((((((......)))))).)))).)))))))))........
SIMILARITIES| miRBase no hits PMRD ath-miRf10459-akr: 0.0007 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
