miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000397
species: Citrus sinensis
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTCCCTACTCCCCCCATGC

miRNA*
 ATGGGTGAGTAGGGAAGATA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GCAAATGGGGAGTAATGGAGAGGGAGTTGAAGGATATTGGGAAGGTTTTGGTATGGGTGAGTAGGGAAGATACTTTAACTAACTAATAATAATATCACTT
TTTTTATTATTACTATTTGCTTAAGGAATTTGCATATCTTCCCTACTCCCCCCATGCCATACGCTTCCCATTATTCCTCCCTCTCCTTACCCCACATCTG
TTCCCA

dot-bracket secondary structure
(((.((((((.((((.((((((((((.....(((((.(((((((((..(((((((((.((((((((((((((((((((.(((.((.((((((((......
....)))))))).)).))).))))))........))))))))))))))..))))))))).)).))))))).)))))))))))))))))))))).))).))
).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR482: 6e-29		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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