ABOUT THIS RECORDspecies: Eucalyptus globulus
miRNA family: MIR169
source: microPC, original name: miR169
Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGCCAAGGATGACTTGCCGA miRNA* GGCAAGTTGTTCTTGGCT mismatches: 3 bulges: 0 |
pre-miRNA
CAGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAATTAATGGAAATAATGAAGTTGGCAAGTT
GTTCTTGGCT
dot-bracket secondary structure
.(((((((((..(((((((((((.((((..((((.(((.((((((..((((......))))......)))))).)))))))..)).))))))))))))).
.)))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAATTAATGGAAATAATGAAGTTGGCAAGTT
GTTCTTGGCT
dot-bracket secondary structure
.(((((((((..(((((((((((.((((..((((.(((.((((((..((((......))))......)))))).)))))))..)).))))))))))))).
.)))))))))
SIMILARITIES| miRBase vvi-MIR169g: 0.00000002 PMRD vvi-miR169g: 0.00000002 microPC miR169: 6e-58 | UniProt no hits RFAM MIR169_2: 0.0000004 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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