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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST044939
species: Phaseolus coccineus
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTT

miRNA*
 GATCATGTGGCAGTTTCA

mismatches: 2
bulges: 1
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pre-miRNA
 TGAAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTTCA

dot-bracket secondary structure
.((((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))).


SIMILARITIES
miRBase gma-MIR167f: 9e-22

PMRD pco-miR167: 1e-33

microPC miR167: 1e-33		UniProt no hits

RFAM MIR167_1: 0.000000000000001

Identical with: pco-miR167 from PMRD (MNEST051324)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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