miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST044941
species: Helianthus ciliaris
source: microPC, original name: miR398

Taxonomy by NCBI:
Helianthus ciliaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GTGTTCTCAGGTCGCCCCT

miRNA*
GTGTGACATGAGAACACAT

mismatches: 2
bulges: 0

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pre-miRNA
AGGTGTGACATGAGAACACATGATATACTTAGATATTTTCACGTGTTCTCAGGTCGCCCCT

dot-bracket secondary structure
(((.(((((.(((((((((.(((.(((......)))..))).))))))))).))))).)))

UniProt no hits

RFAM MIR398: 0.0007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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