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Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa, Humulus lupulus, Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST045090
species: Fragaria vesca
miRNA family: MIR408
source: microPC, original name: miR408

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGCACTGCCTCTTCCCTGGC

miRNA*
 CAGGGACGAGGTAGAGCATGG

mismatches: 4
bulges: 0
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pre-miRNA
 GACAGGGACGAGGTAGAGCATGGATGGAGTTCCCAACAGAACAGTCAAGCTGTTGTGGCTCCACTCATGCACTGCCTCTTCCCTGGC

dot-bracket secondary structure
..((((((.(((((((.(((((..(((((((..((((((..........)))))).)))))))..))))).))))))).))))))..


SIMILARITIES
miRBase vvi-MIR408: 0.00000007

PMRD ppe-miR408: 1e-27

microPC miR408: 3e-44		UniProt no hits

RFAM MIR408: 0.00000000000008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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