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Species belonging to selected taxon:

Persea americana, Aristolochia fimbriata, Liriodendron tulipifera, Saruma henryi



ABOUT THIS RECORD

ID: MNEST045129
species: Liriodendron tulipifera
miRNA family: MIR319
source: microPC, original name: miR319

Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGACTGAAGGGAGCTCC

miRNA*
 AGCTCTCTTCAGTCCAGTC

mismatches: 0
bulges: 0
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pre-miRNA
 GGAGCTCTCTTCAGTCCAGTCCAAGATAGTATTAAGCCAATCTCCGCTGCTGACTCGTTGGCTCATGAACTCATCCAACGGCTAGGATTCCGATGTGTTT
TTGATCCAACGATGCGGGAGCCGTGTTTGGTTCTGTCTGTCTCGTCTTGGACTGAAGGGAGCTCC

dot-bracket secondary structure
(((((((((((((((((((..(.((((((.((..((((((.(.(.(((.(((..(((((((.(((.((((.((((....((........)))))).))))
.))).)))))))..))).))).).).))))))..)))))))).)..)))))))))))))))))))


SIMILARITIES
miRBase vvi-MIR319b: 0.0000000000001

PMRD ltu-miR319: 2e-90

microPC miR319: 2e-90		UniProt no hits

RFAM MIR159: 0.000000000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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