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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000452
species: Citrus unshiu
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Citrus unshiu Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTGGAGTGAAGGGAGCTCCA

miRNA*
 GAGCTCTCTGAACTCCAAGTC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AACTGCAATTAGGGTTTTAATGGAGCTCTCTGAACTCCAAGTCTGGAAGGAGGTGATGGTAGGCCACGGCTGCTAGTCCATGAACACCCGTGGTTGCGCA
GACTCAATACTGTGGCGCAGTCTAAGGGTTTGCATGAACTGGGAGACGAGGCTACCTTGATCTTTTTGGTATTGGAGTGAAGGGAGCTCCATTCATGGAC
ATCTCATTAT

dot-bracket secondary structure
......(((.(((((((.(((((((((((((..(((((((..(((((((((..(((.(((((.((.((.((.(((((.((((...((((.(((((((((.
.((........)).)))))).))).))))...)))).))))).)).)).)))))))))).)))))))))..)))))))..)))))))))))))...))))
.))).)))..


SIMILARITIES
miRBase gma-MIR159b: 8e-16

PMRD gma-miR159b: 8e-16

microPC miR159: 8e-16		UniProt no hits

RFAM MIR159: 6e-20		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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