ABOUT THIS RECORDspecies: Aristolochia fimbriata
source: microPC, original name: miR160
Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCTGGCTCCCTGTATGCCA miRNA* GCGTGCGAGGAGCCAAGC mismatches: 2 bulges: 0 |
pre-miRNA
GCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGC
dot-bracket secondary structure
((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
GCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGC
dot-bracket secondary structure
((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).))
SIMILARITIES| miRBase vvi-MIR160c: 0.00000000002 PMRD vvi-miR160c: 0.00000000002 microPC miR160: 1e-39 | UniProt no hits RFAM mir-160: 0.0000000003 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
