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Species belonging to selected taxon:

Antirrhinum majus, Fraxinus excelsior, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Ocimum basilicum, Salvia miltiorrhiza, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor



ABOUT THIS RECORD

ID: MNEST045413
species: Triphysaria pusilla
miRNA family: MIR171
source: microPC, original name: miR171

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATATC

miRNA*
 TGTTGGAACGGCTCAATCAAA

mismatches: 1
bulges: 0
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pre-miRNA
 GATGTTGGAACGGCTCAATCAAATCAAATCTCCCAAGAATTGGGTCCTTTAGTTTGATTGAGCCGTGCCAATATC

dot-bracket secondary structure
((((((((.(((((((((((((((.(((...((((.....))))...))).))))))))))))))).))))))))


SIMILARITIES
miRBase rco-MIR171e: 4e-21

PMRD vvi-miR171i: 6e-20

microPC miR171: 3e-37		UniProt no hits

RFAM MIR171_1: 7e-20

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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