miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fagus sylvatica, Juglans hindsii x Juglans regia, Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST045908
species: Juglans hindsii x Juglans regia
source: microPC, original name: miR167

Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTAA

miRNA*
 GGATCATATGGCAGCTTCA

mismatches: 4
bulges: 1
View larger
pre-miRNA
 TGAAGCTGCCAGCATGATCTAAACTTTCTTCTCGATTAATCAAGGAAAGATCGGATCATATGGCAGCTTCA

dot-bracket secondary structure
.((((((((((..((((((..(.(((((((...((....)).))))))).)..)))))).)))))))))).


SIMILARITIES
miRBase tcc-MIR167c: 0.00000000005

PMRD sly-miR167: 0.000000003

microPC miR167: 7e-35		UniProt no hits

RFAM MIR167_1: 0.00000001

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;