ABOUT THIS RECORDspecies: Helianthus petiolaris
miRNA family: MIR162
source: microPC, original name: miR162
Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGATAAACCTCTGCATCCAG miRNA* GGATTCAGCGGTTCATCGATC mismatches: 3 bulges: 0 |
pre-miRNA
CTGGATTCAGCGGTTCATCGATCTGTTCCATAATCCTAATGATTAAATGTTCATACGACGATTGAGAGAGGTGGGAAATGGAATCGATCGATAAACCTCT
GCATCCAG
dot-bracket secondary structure
((((((.(((.((((.(((((((.(((((((..(((((....((((.((((.....)))).))))......))))).))))))).))))))).)))).))
).))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CTGGATTCAGCGGTTCATCGATCTGTTCCATAATCCTAATGATTAAATGTTCATACGACGATTGAGAGAGGTGGGAAATGGAATCGATCGATAAACCTCT
GCATCCAG
dot-bracket secondary structure
((((((.(((.((((.(((((((.(((((((..(((((....((((.((((.....)))).))))......))))).))))))).))))))).)))).))
).))))))
SIMILARITIES| miRBase sbi-MIR162: 0.000000001 PMRD osa-miR162a: 0.000000001 microPC miR162: 2e-55 | UniProt no hits RFAM MIR162_2: 0.00000002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
