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Species belonging to selected taxon:
Carthamus tinctorius
,
Centaurea maculosa
,
Centaurea solstitialis
ABOUT THIS RECORD
ID:
MNEST046263
species:
Centaurea solstitialis
miRNA family:
MIR159
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTA
miRNA*
GAGCTCCTTGAAGTCCAATAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TA
GAGCTCCTTGAAGTCCAATAG
AGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTG
TGGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTT
TTTGGATTGAAGGGAGCTCTA
dot-bracket secondary structure
((
(((((((((..(((((((.((
((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).))))
.))..).))))).)))).))).)))))..)))))))...))))))))
.)))))))..)))))))))))
SIMILARITIES
miRBase
vvi-MIR159c
:
0.00000000004
PMRD
vvi-miR159c
:
0.00000000004
microPC
miR159
:
8e-80
UniProt
no hits
RFAM
MIR159: 0.0000000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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