miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Coffea canephora



ABOUT THIS RECORD

ID: MNEST000463
species: Coffea canephora
miRNA family: MIRf345
source: miRNEST

Taxonomy by NCBI:
Coffea canephora Coffea Coffeeae Ixoroideae Rubiaceae Gentianales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CACCAAAGGCCTCTGCCCTTC

miRNA*
 AGGGCGGAGCTTTTGGTTTT

mismatches: 1
bulges: 1
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pre-miRNA
 ACTGGGGGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTAAATAGAGAGGGAGGGCGGAGCTTTTGGTTTTTTCATGTT

dot-bracket secondary structure
......(((((.(((((((((.(((((((((((.((.((.....)).)))))))))))))))))))))).))))).....


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12309-akr: 0.000000000000001

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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