miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST046709
species: Helianthus argophyllus
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Helianthus argophyllus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTTCTCTTTCTGTCA

mismatches: 1
bulges: 2

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pre-miRNA
TGACAGAAGAGAGTGAGCACTCGCCGGCAACCGTATATAGAGATTATACTCTTGTTGGAATTATGCGTGTGCTCACTTCTCTTTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((.(((((((((..(((((.......)))))..)))))).......))).)))))))).)))).))))))).

UniProt no hits

RFAM mir-156: 0.00008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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