miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Coffea canephora, Catharanthus roseus



ABOUT THIS RECORD

ID: MNEST000473
species: Coffea canephora
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Coffea canephora Coffea Coffeeae Ixoroideae Rubiaceae Gentianales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 AAGAAGGTTGATGATGATGGCG

mismatches: 3
bulges: 1
View larger
pre-miRNA
 TGCTGCTCCTGCTGCTGCTGATCATCATCATCATCATCATCATGAGAAGAAGGTTGATGATGATGGCGGCTTCGGTATTATTTATG

dot-bracket secondary structure
.........(((((..((((.((((((((((((((.((.((....)).)).)).))))))))))))))))..))))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;