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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004731
species:
Oryza sativa
miRNA family:
MIRf1521
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGACGGTGGACACGATGGTG
miRNA*
CCATCGCCGCCACCGGGGTG
mismatches:
4
bulges:
1
View larger
pre-miRNA
CCATCTCCGCCA
CCATCGCCGCCACCGGGGTG
AGCTTG
CTGACGGTGGACACGATGGTG
CCGGGGATG
dot-bracket secondary structure
.((((((((.((
((((((...((((((.(((.
.....)
))..))))))...))))))))
.))))))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10277-akr
:
1e-17
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
Source sequences
download this record