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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047341
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10241-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGTGGCCGATCTGCTGAGG
miRNA*
GTAGTAGCCACGGCCATCGAGC
mismatches:
4
bulges:
2
View larger
pre-miRNA
GGTGGTTGCA
GTAGTAGCCACGGCCATCGAGC
ATCGTCGCAATGAGAGGACTAAAGGCGTCAATGGTCTTGACAAGATCATCATCCGCGACCG
TCGTGGC
CGATCTGCTGAGG
TACTCACT
dot-bracket secondary structure
((((..(((.
.((((((...((((((.(((.(
...(((((.((((...(((.......)))..((((((.....))))))))))..))))).)
)))))))
))..))))))..)
))..))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
not a miRNA
additional data
degradome data
download this record