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Species belonging to selected taxon:

Arabidopsis thaliana



ABOUT THIS RECORD

ID: MNEST047430
species: Arabidopsis thaliana
miRNA family: MIRf16
source: PMRD, original name: ath-miRf10330-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCGACCAGGGGGTCGAGT

miRNA*
TCGACCAGGGGGTCGAGTAGTGTC

mismatches: 4
bulges: 3

View larger
pre-miRNA
GATGATACTCGACCAGGGGGTCGAGTAACTTGGTAGAGCGAATGGTCGAGTGATGGTGATGGTGTGGCGAAGTGATACTCGACCAGGGGGTCGAGTAGTG
TC
ATC


dot-bracket secondary structure
((((((((((((((....(((((((((((((.((...(((.((.(((....))).)).....))).)).))))..)))))))))....))))))))...)
))
)))



SIMILARITIES
miRBase no hits

PMRD ath-miRf10329-akr: 6e-55

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ath-miRf10329-akr from PMRD (MNEST047429)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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