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Species belonging to selected taxon:

Arabidopsis thaliana



ABOUT THIS RECORD

ID: MNEST048265
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11165-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGACCTGGTGGTCGAGTGGT

miRNA*
TACTCGACCTCTGGGTCGAG

mismatches: 4
bulges: 0

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pre-miRNA
CTACGCGACCTGGTGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTACTCGACCTCTGGGTCGAGTGG

dot-bracket secondary structure
((((.(((((..(.((((((((((...(((.((...)).)))...)))))))))).)..))))).))))


SIMILARITIES
miRBase no hits

PMRD ath-miRf10831-akr: 3e-31

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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