miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Actinidia chinensis, Actinidia deliciosa, Actinidia eriantha



ABOUT THIS RECORD

ID: MNEST000005
species: Actinidia chinensis
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Actinidia chinensis Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTCTTCCTCGTCCTCTTCCT

miRNA*
 GTGGGGGACCAGGGGGAGGCG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 GTTCCGACGCTGGTGGGGGACCAGGGGGAGGCGTTGACGGGCTTCGTGGAAGAGCTGCTGAGCCCATTGGGCCTGCTCCTGCTGCCCATTGGGCTGCTCC
TTGTGATCCAGTTCCTCTCCTCGGCCCAGGGCTCCGTGGTGGCCGGAATATTCTCGACCGACGAGCCCGACTCCATCCACCGGGTCAGCGGGTCTCCCGT
GGGCGTCGCCCTCTTTCTCTTCCTCGTCCTCTTCCTCCTCTACAA

dot-bracket secondary structure
((....))...((.(((((((.(((((((((....((.((((..((.(((.(((..((((((((((.(((((..((....)).))))).)))))).....
........))))..)))))).))((((.((((((..((((....(((....)))..))))..))))))(((((........))))).(((((...)))))
))))...))))))..))))))))).))))))).))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM 7SK: 0.001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;