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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000528
species: Cynodon dactylon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTCCCTATTT

miRNA*
 TTAGGGACGGAGGGAGTACCA

mismatches: 2
bulges: 0
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pre-miRNA
 CCAACTTCTAGTCTGAATTTCTTGTTGACTTCTACTCCCTCCGTCCCTATTTACTTGTCATCCTAGCCTCCTCCAAATTTCTCAATTTACTTGTCATCCT
CGCATCCCAATGCACCTTTTTACTTTTCCAATACATCTCTATCTCTATCTCTCTCCTCCTCGTTTTCAGCGCATCCACCTTTTTCACCTTCTCTTAATCT
CCGTGCCCAACTCTAAAACGACAAGTAATTAGGGACGGAGGGAGTACCATTTTGTTTGTCCACGAACTCAGTTCAAG

dot-bracket secondary structure
.........((((.((...)).....))))..(((((((((((((((((.(((((((((.........................................
....................................................................................................
...................))))))))).))))))))))))))))).................((((...))))...


SIMILARITIES
miRBase tae-MIR1136: 0.0009

PMRD tae-miR1136: 0.0009

microPC miR1439: 0.0002		UniProt no hits

RFAM MIR1122: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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