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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000528
species: Cynodon dactylon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTCCCTATTT

miRNA*
 TTAGGGACGGAGGGAGTACCA

mismatches: 2
bulges: 0
View larger
pre-miRNA
 CCAACTTCTAGTCTGAATTTCTTGTTGACTTCTACTCCCTCCGTCCCTATTTACTTGTCATCCTAGCCTCCTCCAAATTTCTCAATTTACTTGTCATCCT
CGCATCCCAATGCACCTTTTTACTTTTCCAATACATCTCTATCTCTATCTCTCTCCTCCTCGTTTTCAGCGCATCCACCTTTTTCACCTTCTCTTAATCT
CCGTGCCCAACTCTAAAACGACAAGTAATTAGGGACGGAGGGAGTACCATTTTGTTTGTCCACGAACTCAGTTCAAG

dot-bracket secondary structure
.........((((.((...)).....))))..(((((((((((((((((.(((((((((.........................................
....................................................................................................
...................))))))))).))))))))))))))))).................((((...))))...


SIMILARITIES
miRBase tae-MIR1136: 0.0009

PMRD tae-miR1136: 0.0009

microPC miR1439: 0.0002		UniProt no hits

RFAM MIR1122: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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