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Species belonging to selected taxon:

Cynodon dactylon



ABOUT THIS RECORD

ID: MNEST000530
species: Cynodon dactylon
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAATAAGACGAATGATCAA

miRNA*
 GATCCTTCGTCTTATTTAAAA

mismatches: 1
bulges: 0
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pre-miRNA
 TAGTATGTGTTACTCCCTCCGTCCGAAAATATAAGCATTTATTGATTTTTAGATATCATTTTTGATCCTTCGTCTTATTTAAAAAATTTGTAAAATATAA
AATTAAATAAGTCATATTTAAAGTATATCTAATGATAAAGTTGACTATAATAAAATTAATAATAATTTTATAACTATTTTGAATAAGACGAATGATCAAA
CATAAAATTCAAAAGTCAACAAATACTTATATTTCTGGACAAAGGGAGTACTCTGCTCG

dot-bracket secondary structure
.((((...((.(((((((..(((((.(((((((((.((((.(((((((((.(((...((.(((((((.((((((((((((((((...(((((((((....
.(((((...(((((..((((...(((.....))).))))..))))).........)))))....)))))))))...)))))))))))))))).)))))))
.))...))).))))))))).)))).))))))))).)))))..)))))))))..))))..


SIMILARITIES
miRBase osa-MIR1884a: 0.0000009

PMRD osa-miRf10603-akr: 0.0000002

microPC miR1128: 0.00005		UniProt no hits

RFAM MIR812: 0.00000000000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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