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Species belonging to selected taxon:

Cynodon dactylon



ABOUT THIS RECORD

ID: MNEST000532
species: Cynodon dactylon
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCA

miRNA*
 CATGTGCCCATCTTCTCCACC

mismatches: 4
bulges: 0
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pre-miRNA
 GATAAGAGAGATAGATGGTGGCTGTGCATGGTGGAGAAGCAGGGCACGTGCATTACCATCCAATGCCGCTGGTCATGCTCCTGCTCTACCTCCTCCCTCT
GAGTTCTGAGCTTACCATGGGATCCGGATGGACGGATGGTTCTTCATGTGCCCATCTTCTCCACCGAGCACAAACTGTCTCAATAAACCTCAT

dot-bracket secondary structure
.....(((..(((((((((...(((((.(((((((((((..(((((((((....(((((((....(((.((((...((((..((((..............
))))...))))..)))))))..(((....))).)))))))....)))))))))..))))))))))).))))).)))))))..))....)))..


SIMILARITIES
miRBase zma-MIR164b: 8e-22

PMRD zma-miR164b: 8e-22

microPC miR164: 0.00000000000001		UniProt no hits

RFAM MIR164: 9e-19		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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