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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000532
species: Cynodon dactylon
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCA

miRNA*
 CATGTGCCCATCTTCTCCACC

mismatches: 4
bulges: 0
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pre-miRNA
 GATAAGAGAGATAGATGGTGGCTGTGCATGGTGGAGAAGCAGGGCACGTGCATTACCATCCAATGCCGCTGGTCATGCTCCTGCTCTACCTCCTCCCTCT
GAGTTCTGAGCTTACCATGGGATCCGGATGGACGGATGGTTCTTCATGTGCCCATCTTCTCCACCGAGCACAAACTGTCTCAATAAACCTCAT

dot-bracket secondary structure
.....(((..(((((((((...(((((.(((((((((((..(((((((((....(((((((....(((.((((...((((..((((..............
))))...))))..)))))))..(((....))).)))))))....)))))))))..))))))))))).))))).)))))))..))....)))..


SIMILARITIES
miRBase zma-MIR164b: 8e-22

PMRD zma-miR164b: 8e-22

microPC miR164: 0.00000000000001		UniProt no hits

RFAM MIR164: 9e-19		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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