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Species belonging to selected taxon:
Persea americana
,
Actinidia chinensis
,
Actinidia deliciosa
,
Actinidia eriantha
,
Agrostis stolonifera
,
Allium cepa
,
Amborella trichopoda
,
Antirrhinum majus
,
Aquilegia formosa x Aquilegia pubescens
,
Arachis duranensis
,
Oryza sativa
,
Arachis hypogaea
,
Arachis ipaensis
,
Aristolochia fimbriata
,
Avena barbata
,
Avena sativa
,
Barnadesia spinosa
,
Beta vulgaris
,
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Cichorium intybus
,
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Coffea canephora
,
Cucumis melo subsp. melo
,
Curcuma longa
,
Cynodon dactylon
,
Dioscorea alata
,
Elaeis guineensis
,
Eragrostis curvula
,
Eschscholzia californica
,
Eucalyptus globulus
,
Eucalyptus gunnii
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Festuca arundinacea
,
Festuca pratensis
,
Fragaria vesca
,
Fragaria x ananassa
,
Fraxinus excelsior
,
Gerbera hybrid cultivar
,
Glycine soja
,
Glycyrrhiza uralensis
,
Gossypium arboreum
,
Gossypium hirsutum
,
Gossypium raimondii
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Hevea brasiliensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Humulus lupulus
,
Ipomoea batatas
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Leymus cinereus x Leymus triticoides
,
Limnanthes alba
,
Linum usitatissimum
,
Liriodendron tulipifera
,
Lolium perenne
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Mesembryanthemum crystallinum
,
Mimulus guttatus
,
Mimulus guttatus var. nasutus
,
Mimulus lewisii
,
Musa ABB Group
,
Nicotiana benthamiana
,
Nicotiana langsdorffii x Nicotiana sanderae
,
Nicotiana tabacum
,
Nuphar advena
,
Ocimum basilicum
,
Panax ginseng
,
Panicum virgatum
,
Papaver somniferum
,
Parthenium argentatum
,
Paullinia cupana var. sorbilis
,
Petunia axillaris subsp. axillaris
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Pseudoroegneria spicata
,
Quercus petraea
,
Quercus robur
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Salvia miltiorrhiza
,
Saruma henryi
,
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Sorghum propinquum
,
Striga hermonthica
,
Tamarix hispida
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Thellungiella halophila
,
Theobroma cacao
,
Trifolium pratense
,
Triphysaria pusilla
,
Triphysaria versicolor
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Tropaeolum majus
,
Vitis shuttleworthii
,
Zingiber officinale
,
Zinnia violacea
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Carica papaya
,
Capsicum annuum
,
Carthamus tinctorius
,
Catharanthus roseus
,
Cenchrus ciliaris
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cicer arietinum
,
Cichorium endivia
,
Artemisia annua
,
Brachypodium distachyon
,
Citrus clementina
,
Helianthus annuus
,
Glycine max
,
Arabidopsis thaliana
,
Zea mays
,
Triticum aestivum
,
Solanum tuberosum
,
Vigna unguiculata
,
Vitis vinifera
,
Medicago truncatula
,
Sorghum bicolor
,
Brassica oleracea
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Ipomoea nil
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST053390
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11568-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATAGGCCACATAGCACCTTG
miRNA*
AGGTGGCATGTGGCCTATAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCGTAGT
ATAGGCCACATAGCACCTTG
AACATCTAGCAACCTCTGAGACGCTTCA
AGGTGGCATGTGGCCTATAC
TGCGG
dot-bracket secondary structure
(((((((
(((((((((((..(((((((
(((.(((((......)).))).).))))
)))))..)))))))))))))
)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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