ABOUT THIS RECORDspecies: Triticum monococcum
source: PMRD, original name: tmo-miR1120
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAG miRNA* TATATTAGTTTACAGAGGG mismatches: 0 bulges: 0 |
pre-miRNA
TATTCCCTCTGTAAACTAATATAAGACCTTTTAGATCACTAAAGTAGTGATCTAAAAGGTCTTATATTAGTTTACAGAGGGAGTA
dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TATTCCCTCTGTAAACTAATATAAGACCTTTTAGATCACTAAAGTAGTGATCTAAAAGGTCTTATATTAGTTTACAGAGGGAGTA
dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))))))))))))
SIMILARITIES| miRBase tae-MIR1121: 0.000000000001 PMRD tur-miR1120: 2e-38 microPC miR1121: 0.00000002 | UniProt no hits RFAM MIR1122: 7e-42 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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