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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST005807
species: Triticum aestivum
miRNA family: MIR1136
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGTCGCAGGTATGGATGTATCTA

miRNA*
 TATACATTCATTTCTGCGACAATT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 GTCGGTGCTCGTACGTAGGTACTCCCTCCGTTTCGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTATATACATTCATTTCTGCG
ACAATTAATTTGGAACGGAAGGAGTATCTTTTAGCCAGGCCTTG

dot-bracket secondary structure
...(((.((.((....(((((((((.((((((((((((((.((((((((((.((((((((((.((((...((....)))))).)))))))))).))))))
)))).)))))))))))))).)))))))))....)).)))))...


SIMILARITIES
miRBase tae-MIR1136: 3e-39

PMRD tae-miR1136: 3e-39

microPC miR1439: 6e-31		UniProt no hits

RFAM MIR1122: 7e-34		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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