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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST005807
species: Triticum aestivum
miRNA family: MIR1136
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGTCGCAGGTATGGATGTATCTA

miRNA*
 TATACATTCATTTCTGCGACAATT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 GTCGGTGCTCGTACGTAGGTACTCCCTCCGTTTCGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTATATACATTCATTTCTGCG
ACAATTAATTTGGAACGGAAGGAGTATCTTTTAGCCAGGCCTTG

dot-bracket secondary structure
...(((.((.((....(((((((((.((((((((((((((.((((((((((.((((((((((.((((...((....)))))).)))))))))).))))))
)))).)))))))))))))).)))))))))....)).)))))...


SIMILARITIES
miRBase tae-MIR1136: 3e-39

PMRD tae-miR1136: 3e-39

microPC miR1439: 6e-31		UniProt no hits

RFAM MIR1122: 7e-34		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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