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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Curcuma longa
,
Cynodon dactylon
,
Elaeis guineensis
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Musa ABB Group
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Zingiber officinale
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST000650
species:
Festuca arundinacea
miRNA family:
MIR159
source:
miRNEST
Taxonomy by NCBI:
Festuca arundinacea
Festuca
Loliinae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTG
miRNA*
GAGCTCCTATCATTCCAATGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTTTTGTGTTTGGTTTTGAGGTG
GAGCTCCTATCATTCCAATGA
AAGGTCTTGCTAGGAGGGGTGGTACAGCTGCTCGTTCATGGTTCCCACTATCCTAC
CTCCGTTTGAAACCAGGGAGATAGGCCTGTGGCTAGCATGACCGAGGAGCCGCATCGTCCCCTCGCTGGCCGCTC
TTTGGATTGAAGGGAGCTCTG
CATC
TTGGCCTAGTTCATGT
dot-bracket secondary structure
.....(((...((((..((.(((
((((((((.(((.(((((.((
..((((..((...((((((((((...(((.((((.(((((....((((...((((.
((((............)))).))))...))))....))))).)))).)))...)))).)))))))).))))..))
.))))).))).))))))))))
).))
..)))).....)))..
SIMILARITIES
miRBase
far-MIR159
:
3e-111
PMRD
sar-miR159
:
1e-91
microPC
miR319
:
1e-91
UniProt
no hits
RFAM
MIR159: 7e-26
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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