miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000686
species: Festuca pratensis
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACTCCCTCCGACCCATAAT

miRNA*
 TATGGTACGGAGGGAGTAGCA

mismatches: 3
bulges: 0
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pre-miRNA
 CATTAGAAAGTACTCCCTCCGACCCATAATAAGATGTCATTACAACCAATATACCCATATATTATATTATGGTACGGAGGGAGTAGCAGGTAAC

dot-bracket secondary structure
..........(((((((((((..((((((((.(((((.....................))))).))))))))..))))))))))).........


SIMILARITIES
miRBase osa-MIR1436: 0.00007

PMRD osa-miRf12035-akr: 0.00007

microPC no hits		UniProt no hits

RFAM MIR1122: 0.000005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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