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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST007365
species: Solanum tuberosum
miRNA family: miR168a
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCCGCCTTGCATCAACTGAAT

miRNA*
 TCGCTTGGTGCAGGTCGGGAC

mismatches: 2
bulges: 0
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pre-miRNA
 TTTCTGTTGCGGCGGCCTCTCATTCGCTTGGTGCAGGTCGGGACCTACCTCGCCGGCAACAATGGCGGTAGCTGACGGCGACGGCAGCTTACCGGTAAAA
ACTTTTTTTTTTTACATGTCTGTGGCGTAGTTTGGGTCCCGCCTTGCATCAACTGAATAGGAGACTGCGGTGAAATTT

dot-bracket secondary structure
......((((.((((.((((.(((((.((((((((((.((((((((((..(((((.(((((....(((((((((.((....)).)))).)))))((((((
(.......))))))).))).)))))))..))..)))))))).)))))))))).))))).)))).)))).)))).....


SIMILARITIES
miRBase tcc-MIR168: 0.0000000006

PMRD stu-miR168: 1e-51

microPC miR168: 1e-51		UniProt no hits

RFAM MIR168: 0.0000000007		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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