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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000744
species: Gossypium hirsutum
miRNA family: MIRf137
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTGATGATGCTGCATCAGG

miRNA*
 TTGTGCAGATGTCGAGTAA

mismatches: 2
bulges: 2
View larger
pre-miRNA
 ATTTTTCGGACTGTGAATCACTTAATCTTGTATTTGATGATGCTGCATCAGGCACTTTTGTGGATGAAGAAAAGAAACTTGGTAACATTGGCACAGAGAG
AAATAACCTTGTGCAGATGTCGAGTAATATGAATGATGTCTCACAGTTACCCCTA

dot-bracket secondary structure
........((((((((..((.(((.((...(((((((((...((((((.(((...(((((((((((.....(((...))).....))))..)))))))..
......))).)))))).)))))))))....)).)))))..)))))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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