miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Paracentrotus lividus, Strongylocentrotus purpuratus, Patiria pectinifera



ABOUT THIS RECORD

ID: MNEST007744
species: Paracentrotus lividus
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Paracentrotus lividus Paracentrotus Echinidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGTGTTGTTTTTTGTTTGT

miRNA*
 AGAAAAAGATGCAGCCGATT

mismatches: 3
bulges: 2
View larger
pre-miRNA
 ATGTAGACAATTTGGTGTTGTTTTTTGTTTGTTATTATTATTGTTGTTATTGTGAAAGAAAAAGATGCAGCCGATTTCTACAGT

dot-bracket secondary structure
.((((((....(((((..(((.((((.(((.((((.((.((....)).)).))))..))).)))).))))))))..))))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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