ABOUT THIS RECORDspecies: Paracentrotus lividus
miRNA family: miR-4251
source: miRNEST
Taxonomy by NCBI:
Paracentrotus lividus Paracentrotus Echinidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTGAGAAAAGGGCGAGATCG miRNA* ATCTTTGCCTTTTTCCAGTTT mismatches: 2 bulges: 2 |
pre-miRNA
ACACAACTCATCATCTTTGCCTTTTTCCAGTTTGTCTCATTCCCTAGTATGGTGAAGTCCTTGCATCAAAAGCTGAGTGGTAGAAACCTGAGAAAAGGGC
GAGATCGTCTGATGTG
dot-bracket secondary structure
.((((..((((.(((((.((((((((((((.((...((((((...(((.(((((.........)))))...)))))))))....)).))).)))))))))
))))).)..)))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACAACTCATCATCTTTGCCTTTTTCCAGTTTGTCTCATTCCCTAGTATGGTGAAGTCCTTGCATCAAAAGCTGAGTGGTAGAAACCTGAGAAAAGGGC
GAGATCGTCTGATGTG
dot-bracket secondary structure
.((((..((((.(((((.((((((((((((.((...((((((...(((.(((((.........)))))...)))))))))....)).))).)))))))))
))))).)..)))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q6P423|MED23_XENLA: 0.00000006 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
