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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000809
species: Gossypium raimondii
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGATAGAGAGCAC

miRNA*
 GCTCTTTATGCTTCTGTCATCA

mismatches: 1
bulges: 1
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pre-miRNA
 ATTGTTGTTGACAGAAGATAGAGAGCACAGATGATGGTGTGCAATTAGGAGTCTTGAAGCAATGCATCCCACTCCTTTGTGCTCTTTATGCTTCTGTCAT
CACCTT

dot-bracket secondary structure
.....((.(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).))))))))).
))....


SIMILARITIES
miRBase gra-MIR157a: 1e-52

PMRD gra-miR157a: 1e-52

microPC miR157: 3e-47		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR157 from microPC (MNEST044919)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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