miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000830
species: Guizotia abyssinica
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 TGATGATGAAGATGATGAAA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GAATATAGTTCAATTTCATCGTCATCATCATCATCATCATCATCGGGTTCACACACTCTCTCTACATATGCAGCTATGACACACTCTCTATGCGGTAGAA
ATCTGTACAGAAGGTGGAGAGAGTAATCTTTAGGGCTTCAGTTGGGGGTCTAAAATTAGGGTTTCGATGTGATGATGAAGATGATGAAAGAGAGGTAGAA
GACGATC

dot-bracket secondary structure
........(((.(((((.((.((((((((.(((((((((.(((((((.((....((((((((..((((......))))...((((.(((.(((((.....
..))))).))).))))))))))))....(((.(((((((.....))))))).)))....)).)))))))))))))))).))))))))..))))))).)))
.......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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