miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Botryococcus braunii, Coccomyxa sp. C-169, Volvox carteri, Chlamydomonas reinhardtii



ABOUT THIS RECORD

ID: MNEST008518
species: Chlamydomonas reinhardtii
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACATCGCCATCATCATCATCG

miRNA*
 GTGGTGATGATGGTGCTCTGG

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GGCTTAGCGGCGGCACATGGAGTCGCGCACGAGCTGGATGTGCGACAAAGAGCTGTGTCCAACATCGCCATCATCATCATCGAAGGCGCCGGGCGCTTTC
TCAAGGCGTCGGGGCATGCCAGTCAGGCGAAAGCTTGGGTGGTGGTGATGATGGTGCTCTGGGGCAGTGAGTCGTGCATGCAGATGTATGTGAGGCGGCT
TCATGCGTGTGTCGCGCCCG

dot-bracket secondary structure
(((...((((((((.(((((((((((.((((..(((.(((((((((.....(((((.((((....(((((((((((((((((..((((((.((((((((.
..))))))))..)))..)))..((((((....)))))).)))))))))))))))))...)))))))))..))))))))).))).....))))..))))))
))))).)).)))))))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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