ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-3556
source: miRNEST
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTGATTTCGAATGGTGCTAG miRNA* AAGCACCGATAGGAAGCCAGTGC mismatches: 4 bulges: 2 |
pre-miRNA
CTTCGTCGGGTACTGATTTCGAATGGTGCTAGAACGATTTCATATGCCATCTAAGCACCGATAGGAAGCCAGTGCCCGTCAGG
dot-bracket secondary structure
..((..(((((((((.((((...((((((((((................))).)))))))...))))..)))))))))...))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTCGTCGGGTACTGATTTCGAATGGTGCTAGAACGATTTCATATGCCATCTAAGCACCGATAGGAAGCCAGTGCCCGTCAGG
dot-bracket secondary structure
..((..(((((((((.((((...((((((((((................))).)))))))...))))..)))))))))...))
SIMILARITIES| miRBase cqu-mir-285: 0.000000004 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
